Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., two-component signal transduction system, response regulator from Phaeobacter inhibens DSM 17395

 Score =  181 bits (459), Expect = 9e-51
 Identities = 98/212 (46%), Positives = 140/212 (66%), Gaps = 4/212 (1%)

Query: 5   MDKPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSM 64
           M   IRV++VDDH +V +G  + LE   +IEVV   SNG EA+   +  +PDV+LMD++M
Sbjct: 1   MPNTIRVLIVDDHPMVAEGIQSILESYDDIEVVGIPSNGEEAVTEARALKPDVILMDLNM 60

Query: 65  PIMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKT 124
           P + G+ AT +I E+ P T++L+L+MHD+ EYI   +  GAMGY+LK++   ++ QAI T
Sbjct: 61  PKLGGLSATEIILEQSPATRILILSMHDSPEYISSALAHGAMGYVLKDVPTEEIRQAIDT 120

Query: 125 VHQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYR 184
           V +G TY C     +L  ++          L+ RE+ IL  +AQG S+K +A  L+IS R
Sbjct: 121 VMRGETYLCTGAEGSLKPKD----DPDREALTGREQTILLELAQGKSNKDVALALDISVR 176

Query: 185 TVETHRQNIKHKLDIHSTAELAQYALQHGLLE 216
           TVETHR+NIK KL I STA L +YAL+HG+L+
Sbjct: 177 TVETHRKNIKRKLGISSTAGLTRYALEHGVLQ 208