Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., response regulator (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (311), Expect = 1e-33
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 1/211 (0%)

Query: 7   KPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPI 66
           K I V +VDDH++V  G    LE E  I+VV  A +G  A++  + ++ DV+LMD++MP 
Sbjct: 15  KLISVFLVDDHELVRTGIRRILEDERGIKVVGEAGDGESAVQWCRNNEADVILMDMNMPG 74

Query: 67  MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVH 126
           + G+EATR I     H K+++LT+H    +  +VMQAGA GY+ K  +  +++QAI+ V 
Sbjct: 75  IGGLEATRKILRYQSHAKIIVLTIHTEDPFPTKVMQAGASGYLTKGATPPEVIQAIRQVA 134

Query: 127 QGATYFCESTTSTLFSQEILPVANKP-NPLSRREEAILRMVAQGCSSKKIATLLNISYRT 185
            G  Y        +   +     + P   LS RE  I+ M+  G     I+  LN+S +T
Sbjct: 135 HGQRYLSPEIAQQMALSQFNQSEDNPFKSLSERELQIMMMITNGERVSDISEQLNLSPKT 194

Query: 186 VETHRQNIKHKLDIHSTAELAQYALQHGLLE 216
           V ++R  +  KL I    EL + A+++ +L+
Sbjct: 195 VNSYRYRLFAKLGISGDVELTRLAIRYKMLD 225