Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Dechlorosoma suillum PS

 Score =  123 bits (308), Expect = 3e-33
 Identities = 68/207 (32%), Positives = 117/207 (56%), Gaps = 3/207 (1%)

Query: 9   IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68
           IR+++ DDH +V  G    L  E ++EV   AS G E L  ++    D++LMD+SMP ++
Sbjct: 2   IRILLADDHSIVRSGLKQLLATEADLEVAGEASQGSEVLTRLRQGGIDLLLMDMSMPGIS 61

Query: 69  GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128
           G++  R    E P   V++L+MH+  + + + ++AGA GY+ K+     ++ AI+ V +G
Sbjct: 62  GLDLIRRAHTEAPEVPVVVLSMHNESQLVSRALRAGASGYVTKDSDPAILLAAIRKVARG 121

Query: 129 ATYFCESTTSTLFSQEILPVANKPN-PLSRREEAILRMVAQGCSSKKIATLLNISYRTVE 187
             +   +    +      P    P+  LS RE  +L++++QG +   +   L++S +TV 
Sbjct: 122 GRFIDPALVDAMVFG--APEEAPPHEALSDREFEVLQLLSQGLALAAVGERLHVSAKTVS 179

Query: 188 THRQNIKHKLDIHSTAELAQYALQHGL 214
           TH+  +  KL I + AEL +YAL+HGL
Sbjct: 180 THKTRLMQKLGIDNNAELVRYALRHGL 206