Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Dechlorosoma suillum PS

 Score =  137 bits (346), Expect = 1e-37
 Identities = 78/213 (36%), Positives = 126/213 (59%), Gaps = 10/213 (4%)

Query: 9   IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68
           IR+++ DD  +V  G  + ++  PE  VVA  ++GLEALE  +  +PDV ++D+ MP ++
Sbjct: 8   IRLLLADDQLLVRAGIRSLIQTLPEYVVVAECADGLEALERTQALKPDVAVLDIDMPNLS 67

Query: 69  GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128
           GIEA R I+   P TK+++L+  D RE +   ++AG  GY+LK+    ++  A+  V  G
Sbjct: 68  GIEAMRQIRTVSPETKLMVLSGIDRREVVEAALEAGCHGYLLKDFVLAELQLALDKVMDG 127

Query: 129 ATYFCESTTSTLFS------QEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNIS 182
           + Y        L        +E+LP    P  L+ R+E ILR+VA G ++K+IA  L+IS
Sbjct: 128 SCYLSPKIQQQLLDAMRTDRREMLP----PPQLTPRQEQILRLVALGRTTKEIARELSIS 183

Query: 183 YRTVETHRQNIKHKLDIHSTAELAQYALQHGLL 215
            +TVE HR  +  +L +   A + +YA+QHG++
Sbjct: 184 PKTVEFHRAQLMERLGVRDVAGMTRYAMQHGMV 216