Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., response regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (328), Expect = 1e-35
 Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 1/209 (0%)

Query: 9   IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68
           I + +VDDH++V  G    LE E  I+VV  A +G  A++  + ++ DV+LMD++MP M 
Sbjct: 2   ISIYLVDDHELVRTGIRRILEDERGIKVVGEAPDGETAVQWARQNEADVILMDMNMPGMG 61

Query: 69  GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128
           G+EATR I    PH K+++LT+H    +  +VMQAGA GY+ K  +  +++QAI+ V +G
Sbjct: 62  GLEATRKILRYQPHAKIIVLTVHTEDPFPSKVMQAGASGYLTKGATPPEVLQAIRQVSRG 121

Query: 129 ATYFCESTTSTLFSQEILPVANKP-NPLSRREEAILRMVAQGCSSKKIATLLNISYRTVE 187
             Y        +   +  P    P   LS RE  I+ M+  G     I+  LN+S +TV 
Sbjct: 122 QRYLSPEIAQQMALSQFNPADENPFKALSERELQIMLMITNGEKVNDISEQLNLSPKTVN 181

Query: 188 THRQNIKHKLDIHSTAELAQYALQHGLLE 216
           ++R  +  KL I    EL + A+++ +L+
Sbjct: 182 SYRYRLFAKLGISGDVELTRLAIRYKMLD 210