Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  127 bits (320), Expect = 7e-34
 Identities = 91/335 (27%), Positives = 164/335 (48%), Gaps = 21/335 (6%)

Query: 1   MPLKAKLILLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVA 60
           + LKAK++ LA+LP+L++   IS  +    K    +E++  R +L+ E + +L++ V V 
Sbjct: 3   LSLKAKVLSLAILPVLLSAVIISLTTAFILKEQASKEVQQTRERLLSEAKATLQNYVAVG 62

Query: 61  FDAVRLIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQNL 120
             A++ + +     + EA+ Q   +L+NI YG DGYFF YD++   L     P+ VG++ 
Sbjct: 63  LTAIKPLYDAAAPGDNEARAQAIKLLSNISYGKDGYFFGYDSETIRLFKANSPDGVGKSF 122

Query: 121 WQLQDERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTGLY 180
              +D  G ++ + L+  A+ G  Y +Y    P S + VPKL Y+ +L  W+  +G+ + 
Sbjct: 123 KDNRDPNGVYVNRDLVKVAKDGTHYLEYSSPLPGSNDLVPKLGYTEYLPKWDLAVGSSVN 182

Query: 181 IEDLSHEVEKMQAAVNANIDTTFFSVVVILIVTVAVIIVLTLAIN---LHEHRLADKNLK 237
           ++ +  +V  ++A V+  +     S+V I  V + VI V+ L +    L    L   NL 
Sbjct: 183 LDGIEAQVALVEAKVHDRLQGVILSIVGIAAVVLLVIAVVGLVLANTILRPLHLMKDNLD 242

Query: 238 -------DLVHKTVLFQEDEKKHLARELH------DGINQLLVSSKCHLELLANQLNDPK 284
                  DL  +  +  +DE   LA   +       G+ + +      L  L  Q+++  
Sbjct: 243 DIAAGEGDLTRRLTITSQDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQA 302

Query: 285 QIVH--LEKSQH---SLMTAINEVRRISHHLRPSA 314
           Q     +E+ +H    + TAINE+   +  +  SA
Sbjct: 303 QRSEQAMERQRHETDQVATAINEMSSAAQEVARSA 337