Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  115 bits (288), Expect = 4e-30
 Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 2/214 (0%)

Query: 232 ADKNLKDLVHKTVLFQEDEKKHLARELHDGINQLLVSSKCHLELLANQLNDPKQIVHLEK 291
           A++ L+ L  + +  QE E++ +AR+LHD + Q L   K HL+ L  +     +   L +
Sbjct: 461 ANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHLQRLIRRQAGDSEFERLSQ 520

Query: 292 SQHSLM-TAINEVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQMEIEMLFDTQPGKL 350
              + M  A+ +VR +S  L P  L+ LGL+AA+   L+ F   S    E+       ++
Sbjct: 521 PLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFLEASGTCWELEVRGSTTEI 580

Query: 351 KSEVATTLYRVVQESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDDGVGFSSKEALQ-KR 409
               A   +R+VQE++NN+ +HA+A  V +L+      L+L + DDG GF   EALQ  +
Sbjct: 581 PPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLEILDDGRGFDVPEALQGAQ 640

Query: 410 GIGLRNMRERVEFIGGEFELSSEPQLGTEITVLL 443
            +GL +M ERV   GG+  +SS P +GT IT LL
Sbjct: 641 SLGLTSMHERVASFGGDLRISSLPGMGTRITALL 674