Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 805 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  113 bits (282), Expect = 3e-29
 Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 3/213 (1%)

Query: 236 LKDLVHKTVLFQEDEKKHLARELHDGINQLLVSSKCHLEL--LANQLNDPKQIVHLEKSQ 293
           L++L       +E+EK H+ARE+HD + Q+L   K    +  L     DP     LE  +
Sbjct: 579 LRELAAHLETVREEEKAHIAREVHDELGQVLTVLKLETSMCELGFADLDPALAQRLESMK 638

Query: 294 HSLMTAINEVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQMEIEMLFDTQPGKLKSE 353
             +      VR ++  LRP  LD  G+ +A+      F+  S +   +     P  L + 
Sbjct: 639 RLIAQLFQRVRDVATALRPPILD-AGIASAVEWQARRFEERSGVACLVEVPECPPALGNA 697

Query: 354 VATTLYRVVQESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDDGVGFSSKEALQKRGIGL 413
            A  L+R++QESL N+ +HA+A+ V+V LQ  GD+L L V DDG GF+          GL
Sbjct: 698 KAIGLFRILQESLTNVMRHARAQTVSVQLQLEGDLLCLRVSDDGCGFADAGRSAGSSFGL 757

Query: 414 RNMRERVEFIGGEFELSSEPQLGTEITVLLKLD 446
             MRER++ +GG+  + S+P  GT IT  + LD
Sbjct: 758 VGMRERIQMLGGQLCIDSQPGEGTTITARVPLD 790