Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score = 98.2 bits (243), Expect = 6e-25
 Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 36/320 (11%)

Query: 9   LLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVA---FDAVR 65
           LL  +P+      I  +++     LG   I+  R+ L   ++ S +  VE A   F+  R
Sbjct: 3   LLRNVPISKRLWLIPVVAVVMLFILGLLMIQQVRSDLYRGKQESTRHVVEAASGVFEHYR 62

Query: 66  LIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQNLWQLQD 125
            +  +  ++ AEA++     +  +RY    Y++  D   T ++HP+QP+L GQ+L +++D
Sbjct: 63  KLELSGAMTTAEAQKAAIEQIRLLRYDGQDYYWINDLGPTMIMHPMQPKLDGQDLSKIKD 122

Query: 126 ERGDFLIQALLFQAQ-SGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTGLYIEDL 184
             G  L   ++  AQ  G G   Y+W KP     VPK+SY      W W+IG+G+Y++D+
Sbjct: 123 PEGKELFNEMVRIAQRDGAGLVDYMWAKPGEENPVPKISYVQLFKPWGWIIGSGIYVDDV 182

Query: 185 SHEVEKMQAAVNANIDTTFFSVVVILIVTVAVIIVLTLAIN----LHEHRLADKNL---- 236
             E              T FS++ +LI  +  ++V  L  +    L     A  N+    
Sbjct: 183 EQEFWNY---------LTRFSLIGLLISAIMAVLVAILIRSIVRPLRHTMAAMANIASGE 233

Query: 237 KDLVHKTVLFQEDEKKHLARE-------LHDGINQL------LVSSKCHLELLANQLNDP 283
            DL     +   DE   L R+       L   + QL      L  S   L  L+ Q ++ 
Sbjct: 234 ADLTRTLDVSGNDELTTLGRDFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQ 293

Query: 284 KQIVHLEKSQHSLMTAINEV 303
            Q   L+  Q  + TAINEV
Sbjct: 294 SQQQMLQMEQ--VATAINEV 311