Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  132 bits (331), Expect = 4e-35
 Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 27/336 (8%)

Query: 3   LKAKLILLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVAFD 62
           L+AKL+LLAL P+L+    +S +S+ Q K L  ++    RA L+ +R   LK  VE+A +
Sbjct: 7   LRAKLLLLALGPILLLAVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHYVELAKN 66

Query: 63  AVRLIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQNLWQ 122
           A+  I       + +A+ Q  A+   + YGS+GYF+ YD Q   +      E +G++   
Sbjct: 67  AIGPIYERSAEGDMQARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIGESFAD 126

Query: 123 LQDERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTGLYIE 182
            +D  G F I+ L+   Q    Y  Y +  P S   VPK+ Y+ +L  W  + GT L ++
Sbjct: 127 YRDPNGVFAIRELVKAGQDSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFGTSLNLD 186

Query: 183 DLSHEVEKMQAAVNANIDTTFF----SVVVILIVTVAVIIVLTLAI---------NLHEH 229
           D+  +V + +A   A ID+       S +++LI+   + ++++ AI         NL + 
Sbjct: 187 DVERDVVEARAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDM 246

Query: 230 RLADKNLKDLVHKTVLFQEDEKKHLA-------RELHDGINQLLVSSKCHLEL---LANQ 279
              D    DL H+  +   DE   L+        ++H  + Q+  ++     L   +A+Q
Sbjct: 247 AQGD---GDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQ 303

Query: 280 LNDPKQIVHLEKSQ-HSLMTAINEVRRISHHLRPSA 314
               +Q +  ++S+   + TAINE+   +H +  SA
Sbjct: 304 AQRSEQAMADQRSETDQVATAINEMSAAAHEVAMSA 339