Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  112 bits (280), Expect = 3e-29
 Identities = 69/233 (29%), Positives = 124/233 (53%), Gaps = 17/233 (7%)

Query: 3   LKAKLILLALLPL-LIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVAF 61
           L+ KL+LLA++PL LI TA +S+    +++ L    + +F+ KL+ ER+  L+++ ++A 
Sbjct: 10  LRNKLLLLAMVPLVLILTAVMSYSWQVESQALDD-SVALFKEKLVNERQQQLQEATQIAL 68

Query: 62  DAVR---LIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQ 118
             V     +  N N+++A         L  +R+GS GYFF YD QG N+ H   P L G 
Sbjct: 69  AVVDHQISLGQNGNINDA---------LRPLRFGSAGYFFIYDYQGANVFHATNPALEGT 119

Query: 119 NLWQLQDERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTG 178
               + D +G  ++  L+  A+ GGG+  Y++ KP     V K+ Y+A +   +W++GTG
Sbjct: 120 PQIGMTDPQGTKIVVGLIDAAKRGGGFFNYVYPKPGVEGLVDKIGYAAPIPGKDWLLGTG 179

Query: 179 LYIEDLSHEVEKMQAAVNANIDTTFFSVVVILIVTVAVIIVLTLAINLHEHRL 231
            Y++D+   V+    +        +   V I ++++ +  +  +AI    HR+
Sbjct: 180 AYLDDIDAAVDTYSQSAR---QAMWEKAVAIFMMSLVLAFITLIAIWSAAHRM 229