Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1046 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  109 bits (273), Expect = 4e-28
 Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 12/231 (5%)

Query: 218  IVLTLAINLHEHRLADKNLKDLVHKTVLFQEDEKKHLARELHDGINQLLVSSKCHLELLA 277
            ++  L  N    + A + +++L  +    +E+E+K ++RELHD   Q L +++  L+L  
Sbjct: 815  VIEKLRQNEQHLKSAFEGMRNLATRLQYAKEEERKSISRELHDQFGQSLTATQISLQLFR 874

Query: 278  NQL-NDPKQIVHLEKSQHSLMTAINEVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQ 336
             Q   DPK I   +    ++   I +VR IS  LRPS LDD+GL A L   L   K+ S 
Sbjct: 875  RQHPGDPKLI---DTCITTIQAMIKQVRAISFDLRPSLLDDVGLVAGLHHQLN--KMSSS 929

Query: 337  MEIEMLF--DTQPGKLKSEVATTLYRVVQESLNNIEKHAKAEKVTVLLQQMGDMLQLMVR 394
            +   ++F  DT   +L  E+  TL+RV+QES+ N  +HA A ++ V L   GD ++  V 
Sbjct: 930  LTHPIIFNADTDIPELSPELTITLFRVIQESVTNAIRHANATRIEVKLYPDGDKIKAEVS 989

Query: 395  DDGVGFS----SKEALQKRGIGLRNMRERVEFIGGEFELSSEPQLGTEITV 441
            D+GVGF     S +  +   +GL  + ERV+   G   + + P  G  I+V
Sbjct: 990  DNGVGFEPGGISAKVSKGGHLGLLGIEERVKSQNGNLNIKAIPHGGVSISV 1040