Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (310), Expect = 1e-32
 Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 14/250 (5%)

Query: 3   LKAKLILLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVAFD 62
           +K KL++ ALLPL+++   +  I+ +      +  +  F+A L  ER+  LKD V++A D
Sbjct: 6   MKNKLLVFALLPLILSFLFLVSITYNLESNSLEENMSTFKASLYSERKAQLKDQVDIALD 65

Query: 63  AVRLIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQNLWQ 122
            V        LS   A    KA L N+R+G+ GYFF YD  G N  H ++P L G     
Sbjct: 66  IVE-----HQLSLGTAGDVNKA-LRNVRFGTAGYFFIYDFDGFNRFHAVKPALEGTAQIG 119

Query: 123 LQDERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTGLYIE 182
           + D  G  ++  L+  A+SG G+  Y + KP     VPK+ Y+A +   +W++GTG Y +
Sbjct: 120 MTDPNGKKIVVGLIDAARSGDGFFNYDYSKPGVTGLVPKIGYAATVPGKDWILGTGAYTD 179

Query: 183 DLSHEVEKMQAAVNANIDTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKNLKDLVHK 242
           D+  +VE  +  +  +++     +++  +V VA+  V+ L        +A + + + +H 
Sbjct: 180 DIDAQVESYREVMTKHMNDKAMMILLFALVLVAITAVVML--------VAAQRMVNPIHN 231

Query: 243 TVLFQEDEKK 252
            V   ED  K
Sbjct: 232 MVQNLEDIAK 241