Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  278 bits (712), Expect = 2e-79
 Identities = 168/442 (38%), Positives = 245/442 (55%), Gaps = 4/442 (0%)

Query: 6   KLILLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVAFDAVR 65
           KL LLA +PL++A A+IS +   Q + L +REI     +L+E ++  L++ +++A  A  
Sbjct: 19  KLFLLATIPLVLAVAAISVVVADQGRQLAEREISGLETQLIEAKKRELRNYIQLARTAFF 78

Query: 66  LIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQNLWQLQD 125
                    +  AK++V  +L  + YG DG+FF Y   GTNLV P Q EL+ +N     D
Sbjct: 79  AEYGRAAPDDEAAKERVTQILAAMLYGRDGFFFVYHYDGTNLVSPRQTELINRNWTGRTD 138

Query: 126 ERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTGLYIEDLS 185
             G  ++  L+  A++G GYH Y W KPS+GE    ++Y   L DW+W +GTG++I+D+ 
Sbjct: 139 SNGVPVVDELVRIARAGAGYHTYDWVKPSTGEEARMITYVVGLQDWQWALGTGIFIDDVL 198

Query: 186 HEVEKMQAAVNANIDTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKNLKDLVHKTVL 245
             V   +AA  + I  TFF +  I +  +  +    L IN+ E RLAD  LK L  + + 
Sbjct: 199 THVAAARAATESRIAQTFFWIGAITLAALLAVFASGLLINIRERRLADAKLKALTQRVLD 258

Query: 246 FQEDEKKHLARELHDGINQLLVSSKCHLELLAN--QLNDPKQIVHLEKSQHSLMTAINEV 303
            QE+E+  +ARELHD I+QLLV  +  LEL     Q  D +   ++EK    L  AI EV
Sbjct: 259 TQEEERGRVARELHDSISQLLVGIRYALELARRRVQTGDARAQENIEKGIDGLNGAIQEV 318

Query: 304 RRISHHLRPSALDDLGLQAALTTLLEDFKLHSQMEIEMLFDTQPGKLKSEVATTLYRVVQ 363
           RRIS  LRP  LDDLGL  A+  L E+F   + +  EM       +L  E    LYR+ Q
Sbjct: 319 RRISRDLRPGQLDDLGLGPAIQDLAEEFTKRTGIRAEMKTVVFRNRLDPEAKIALYRIAQ 378

Query: 364 ESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDDGVGFSSKEALQKRGIGLRNMRERVEFI 423
           E+L NIE+HA+A +V + L        L V D+G G ++  +    G+GLRNM+ERVE +
Sbjct: 379 EALTNIERHAQATEVHLDLFGHQTGATLRVADNGRGLAN-VSRGAGGLGLRNMQERVEQL 437

Query: 424 GGEFELSSEPQLGTEITVLLKL 445
            G  ++ S  + GT I   + L
Sbjct: 438 DGTLQVFSS-EAGTRIDATVPL 458