Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  142 bits (359), Expect = 2e-38
 Identities = 94/328 (28%), Positives = 165/328 (50%), Gaps = 35/328 (10%)

Query: 1   MPLKAKLILLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVA 60
           + L+ KL+LL+L PL++    +  +S +  +     E+  FR KL+ ER+  +K++ E+A
Sbjct: 4   LSLRNKLLLLSLFPLILTLLVLMTVSYYVEQESLAEEVVTFRTKLVGERKQQIKEATEIA 63

Query: 61  FDAVRLIANNPNLSEAEAKQQ--VKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQ 118
              V+         +   K Q  V   L +IR+GS GYFF YD+QG N+ H + P L GQ
Sbjct: 64  AGIVQY--------QLSLKDQGNVNQALRDIRFGSAGYFFIYDSQGKNIFHALMPNLEGQ 115

Query: 119 NLWQLQDERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTG 178
           N   + D RG  +I  LL  A+ G G   Y ++KP++ E + K+SY   +   +WM+GTG
Sbjct: 116 NKIDMTDPRGTKIIVGLLDAAKRGDGNFSYYYQKPNTNEQIEKISYVMMVPGTDWMLGTG 175

Query: 179 LYIEDLSHEVEKMQAAVNANI-DTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKNLK 237
            YI+D+   VE  +  V   + D +F  +++ L++T     ++ +A   H   +  KN+ 
Sbjct: 176 AYIDDIEAVVEDYRQTVTEQMADKSFMILLIALVLTGITAFIIMVA--AHRMVVPIKNMA 233

Query: 238 DLVHKTVLFQEDEKKHLARELHDGINQL-----------------LVSSKCHLELLANQL 280
           D ++     + D  K L+ +  D I QL                 + ++   ++  AN +
Sbjct: 234 DSLNDIAKGEGDLTKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAI 293

Query: 281 NDPKQIVHLEKSQHS-----LMTAINEV 303
           +D  +++  +   H+     ++TAI E+
Sbjct: 294 HDQTKVMSSQLLSHNNETDQVVTAITEM 321