Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score =  358 bits (918), Expect = e-103
 Identities = 193/434 (44%), Positives = 277/434 (63%), Gaps = 17/434 (3%)

Query: 4   IVMFFVALFALLLGFPVAFTFGGIALIFG-------------LWAEGIEMFAFMPYRIQS 50
           I MF   +  LLLGFPVA++  GI L+F              LW         +  RI  
Sbjct: 9   IAMFASFMGLLLLGFPVAWSLAGIGLLFAVLGYVLVEHFDANLWFTWDGTIGVLDARIYG 68

Query: 51  IMENTVLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTG 110
           I+ N +++A+PLF+FMG++L ++ +AE+L+ S+ R+ G + GG A++ V+VG LLAASTG
Sbjct: 69  IVANELMVALPLFIFMGIMLDRSGIAERLMHSLVRVLGPLRGGYAVTVVVVGILLAASTG 128

Query: 111 VVGASVVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVP--- 167
           +VGASV  +G++S+  ML+  Y+K LA GT C+ GTLG +IPPSI+L+L+ D LG     
Sbjct: 129 IVGASVALLGMLSIGPMLQANYNKSLAVGTACSVGTLGILIPPSIMLVLMADRLGTSEAS 188

Query: 168 VGDLFQAALWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPL 227
           VG LF  AL PG+ML   YI+YI+I A L    A P   +      + ++    AV+PPL
Sbjct: 189 VGKLFMGALIPGMMLALMYILYIVIVAWLKKDFA-PAPVNRPKLDARALLDVFWAVVPPL 247

Query: 228 ALIVVVLGSIFAGVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAI 287
           ALI  VLGSIF G+AT TE++A+G  GA+L+A A  + +  ++ DA  +T +  A +F I
Sbjct: 248 ALIFAVLGSIFFGIATTTEASAVGAFGALLMAAASRRLNLPVLKDALYQTSRTAAFIFGI 307

Query: 288 LLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVP 347
            +GAT F+      GGD+++   +  LP  + G L+  + +  +LGFF+D+VEI  II+P
Sbjct: 308 FIGATVFAAVLRGLGGDDVIRAALTGLPFGQTGVLLTVLAITFLLGFFLDWVEITLIILP 367

Query: 348 ILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPF 407
           ++APV   M VD  WFAIL A+ LQTSFLTPP GF+LFY+KGV P  +TT D+Y GV+P+
Sbjct: 368 LVAPVLFSMGVDPLWFAILFALCLQTSFLTPPVGFALFYIKGVCPPGITTRDVYLGVLPY 427

Query: 408 ILIQILVLISLMVF 421
           I+IQ++ L  +  F
Sbjct: 428 IVIQLIGLALVFYF 441