Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., transmembrane protein from Sinorhizobium meliloti 1021

 Score =  166 bits (421), Expect = 1e-45
 Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 23/269 (8%)

Query: 164 LGVPVGDLFQAA---------LWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQ 214
           LG P+ D   A          +W GL    A    +  Y  +  +             R 
Sbjct: 312 LGAPLADAGPATADGPATSFYVWFGLAAAVAVFALLRYYRNMTAE-------------RL 358

Query: 215 EVVKALKAVIPPLALI-VVVLGSIFAGVATPTESAALGGAGAILLALAYGQFSWSMVYDA 273
           +VVK L + + PLA++ VVVLG I  G+ T TESAA+G AGA LLAL      W    +A
Sbjct: 359 QVVKLLVSSVMPLAILTVVVLGVILFGITTATESAAVGAAGAFLLALQARTLDWQRTKEA 418

Query: 274 SKETVKVTAMVFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILG 333
              T K TAMV  + +G+  FS  F   GG  LVE+W++ L      F+I++  +I ILG
Sbjct: 419 VFLTAKTTAMVCWLFVGSALFSAVFAILGGQALVEQWVLALNLTPVQFMILSQAIIFILG 478

Query: 334 FFIDFVEICFIIVPILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPK 393
           + +++ EI  I VPI  P+    D+D   + +L+ +NLQ +FL+PP   S +YLKGV+P 
Sbjct: 479 WPLEWTEIIIIFVPIFLPMLHHFDIDPILWGVLVFVNLQAAFLSPPVAMSAYYLKGVSPP 538

Query: 394 SVTTMDIYRGVVPFILIQILVLISLMVFP 422
            VT   I+ G++P++LI IL +I + ++P
Sbjct: 539 QVTLNQIFAGMMPYMLIVILCMIMMYIWP 567



 Score =  143 bits (360), Expect = 2e-38
 Identities = 77/208 (37%), Positives = 125/208 (60%), Gaps = 8/208 (3%)

Query: 2   IGIVMFFVALFALLLGFPVAFTFGGIALIFGLWA--EGIE------MFAFMPYRIQSIME 53
           +G+ M  + +  +++GFP AFT  G+ ++FG +A    +E      +F  M  R    M 
Sbjct: 6   LGLTMLGLIVVVIMMGFPTAFTLMGLGMLFGFYAFYNPVEPWIDNRVFDLMVQRTYGAMT 65

Query: 54  NTVLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVG 113
           N VL+++PLFV MG V+++  L +++  S+   F  +   +A++T++V T    ++G+VG
Sbjct: 66  NDVLISIPLFVLMGYVMERGALVDKMFYSIQLSFRRVPASLAVTTLIVCTFWGIASGLVG 125

Query: 114 ASVVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQ 173
           A VV MG+I++  ML+  YD  LA G I A GTLG +IPPS+++I+   V G  V  L+ 
Sbjct: 126 AVVVLMGVIAMNPMLRAGYDVKLASGVITAGGTLGILIPPSVMIIVYAAVAGQSVVKLYA 185

Query: 174 AALWPGLMLVAAYIIYILIYAKLNPQAA 201
           A ++PG  L   Y+ Y+L +A LNP+ A
Sbjct: 186 ATMFPGFFLALLYLAYVLGWAMLNPKIA 213