Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., permease from Sinorhizobium meliloti 1021

 Score =  185 bits (469), Expect = 3e-51
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 12/418 (2%)

Query: 8   FVALFALLL-GFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFM 66
           F   FALL+ G PV FT    AL + LW +G  +  F   R+ + + +  L+AVP F+  
Sbjct: 5   FGGWFALLIAGMPVGFTLIVAALAYMLW-QGTGL-NFAGQRMIAGLNSFPLLAVPFFILT 62

Query: 67  GLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISLPV 126
             ++  + + E++ +    L G I GG+    ++   L +  +G   A    +G + +  
Sbjct: 63  AQLMNLSGVTERIFDFAKALVGHIRGGLGHVNIMASVLFSGMSGSAVADAAGLGQLEIKA 122

Query: 127 MLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVAAY 186
           M    YD+  +     AS  +G +IPPSI L++ G +    +G LF   + PGL+  A+ 
Sbjct: 123 MRDAGYDEQFSGSITAASAIIGPLIPPSIPLVVYGVIANTSIGGLFLGGIVPGLLCAASL 182

Query: 187 IIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATPTE 246
           +I + + A     A       A  +  + V       + PL    +++G IFAGV +PTE
Sbjct: 183 MIMVYVIAWRRNYAT------AQRAGFRRVWSTFWHALLPLITPFIIIGGIFAGVFSPTE 236

Query: 247 SAALGGAGAILLALA-YGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDE 305
           +A +  + A+ L +  Y + +++ +    +ETV  TA V  +++G + F          +
Sbjct: 237 AAVVAASYALFLGVVVYREITFAKLVTVLRETVSHTAAVGLLIMGVSLFGYVIAREQVPQ 296

Query: 306 LVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAI 365
            V  + +    D   FLI+  L++L LG FI+ + I  +IVP+L P A+   VD   F +
Sbjct: 297 HVATFFLTYAEDPLTFLILVNLMLLALGTFIEALAILLLIVPVLVPTALQFGVDPVHFGV 356

Query: 366 LIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFPS 423
           ++  NL    LTPP G +LF +  VA   +    + RG++P ++  ++VL+ + +FP+
Sbjct: 357 MVVFNLMIGILTPPMGVALFVVSKVA--DIPFGVLARGILPLLIPLVVVLVLITIFPA 412