Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., alpha-ketoglutarate TRAP transporter, large permease component (from data) from Shewanella amazonensis SB2B

 Score =  174 bits (441), Expect = 5e-48
 Identities = 126/455 (27%), Positives = 218/455 (47%), Gaps = 44/455 (9%)

Query: 4   IVMFFVALF-ALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPL 62
           I   F+ LF  +LLG P+A   G  +++  L      + +      ++  E+  L+A+P 
Sbjct: 3   IATLFLTLFLCMLLGMPIAIALGFSSMLTILLFSNDSLASVALKLYEATSEHYTLLAIPF 62

Query: 63  FVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLI 122
           F+     L    +A ++++      G I GG+A+++V+   L AA +G   A+V A+G I
Sbjct: 63  FILSSAFLSTGGVARRIIDFAMDSVGHIRGGLAMASVMACMLFAAVSGSSPATVAAIGSI 122

Query: 123 SLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLML 182
            +  M++  Y +  A G I  SGTLG +IPPSIV+++      V    +F A L PGL++
Sbjct: 123 VIVGMVRAGYPQKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGLLM 182

Query: 183 VAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVA 242
               ++ I I A++    + P      LS     + + KA +  LALI +VLGSI+ GVA
Sbjct: 183 GVLLMVAIYIVARIKNLPSRPFPGVKALS-----LSSAKA-MGGLALIFIVLGSIYGGVA 236

Query: 243 TPTESAALGGAGAILLAL-------AYGQFSW---------------------------- 267
           +PTE+AA+    A L+A+          +  W                            
Sbjct: 237 SPTEAAAVACVYAYLVAVFGYRDIGPLKEVPWRKEGEAILAAIVRNLLHVGLGLIKTPTD 296

Query: 268 SMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTML 327
             + +  ++  KV+ M+  I+  A  F+   T      ++ E ++      WGFLI+  L
Sbjct: 297 KEIRNVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAETIVGWGLPPWGFLIIVNL 356

Query: 328 VILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYL 387
           ++L  G F++   I  I+ PIL P+AV + +D     I++ +N++   LTPP G +LF  
Sbjct: 357 LLLAAGNFMEPSAILLIMAPILFPIAVQLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVT 416

Query: 388 KGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFP 422
            G+  +S+    +    +P++L+ +  L+ +   P
Sbjct: 417 AGITGRSIGW--VIHACLPWLLLLLGFLVLITYVP 449