Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

 Score =  205 bits (522), Expect = 2e-57
 Identities = 133/485 (27%), Positives = 228/485 (47%), Gaps = 65/485 (13%)

Query: 1   MIGIVMFFVALFALLLGFPVAFTFGGIALIFG--LWAEGIEMFAFMPYRIQSIMENTVLM 58
           +I I+MF   +  L+ G  V    G +  + G  LW  G     F       +M+   L+
Sbjct: 5   LIAIMMFAGMMLMLMTGQRVFGAIGFVGALAGMLLWGTGGSEIPFSA--AMKLMKWYPLL 62

Query: 59  AVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVA 118
            +P+F+FMG VL ++K+A+ L        G + GG+AI T+ +  L++A  G+  A +  
Sbjct: 63  TLPMFIFMGYVLSESKIADDLYRMFHVWMGPVKGGLAIGTIGLMVLISAMNGLSVAGMAI 122

Query: 119 MGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWP 178
              I+LP +L+  YDK L  GTI A  +LG ++PPS+VL+L   +   PVG L+ A + P
Sbjct: 123 GATIALPELLRRGYDKTLVTGTIQAGSSLGILVPPSVVLVLYAMIARQPVGQLWLAGVVP 182

Query: 179 GLMLVAAYIIYILIYAKLNPQAAMPIEPD--------ADLSRRQEVVKALKAVIPPL--- 227
           GL++   +IIYI + A++ P+    + P+        +D   R   V     V+ PL   
Sbjct: 183 GLLMATMFIIYIYLRARMQPELGPAMSPEDLAEYERISDHPLRLNYVALALLVLVPLVVK 242

Query: 228 --------ALIVVVLGS---------------------------------IFAGVATP-- 244
                   A+ V + GS                                 IFA +  P  
Sbjct: 243 LGVIEAKPAIGVALAGSVLAFVTRGIPAFYHDVFMREKYRLLFSGVLPLAIFAAMMVPFV 302

Query: 245 ------TESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAF 298
                  ES+A+G   A + A+  G+ +  +   + + T+ ++ M   I+L A  F   F
Sbjct: 303 NGWTSLVESSAIGAMTAFIAAILKGRMNKEVFETSVRSTLGISCMFMWIILAALGFGAIF 362

Query: 299 TYTGGDELVEEWMMNLPG-DKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMD 357
              G  + +E+      G   W  LI+  L  +++G F+D   +  I+ P+  P+   + 
Sbjct: 363 DGLGAVKAIEDLFTTQLGLSPWMILILMQLSFIVMGTFLDDTAMLVIVAPLYVPLVGALG 422

Query: 358 VDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLIS 417
            D+ W+ +L  +  Q +++TPPFG++LF ++ +AP  +   DIY  ++PF  + ++ L  
Sbjct: 423 FDLIWYGVLYTITTQIAYMTPPFGYNLFLMRAMAPPEIGLKDIYVSIIPFAAVMVVALAL 482

Query: 418 LMVFP 422
           +M+FP
Sbjct: 483 VMIFP 487