Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

 Score =  166 bits (421), Expect = 1e-45
 Identities = 122/459 (26%), Positives = 203/459 (44%), Gaps = 44/459 (9%)

Query: 2   IGIVMFFVALFALLLGFPVAFTFGG---IALIFGLWAEGIEMFAFMPYRI---------- 48
           IG+ +    L  +LLG  VAF  G    + L++  WA+    F + P R           
Sbjct: 6   IGLWVSGFLLATVLLGMRVAFAAGLAGLVGLVWIFWAK----FGYDPERFTKAVTIAVKT 61

Query: 49  -----QSIMENTVLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGT 103
                 S + +  L  +P F+ +G +     L + L E+  R    + GG+A+STV    
Sbjct: 62  AGQVPHSKVSSQALSLIPTFILIGYLAYYAGLTKALFEAAKRWLAWVPGGLAVSTVFATA 121

Query: 104 LLAASTGVVGASVVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDV 163
             AA +G   A+      I++P MLK  YDK  A G + A GTL  +IPPS +L++   +
Sbjct: 122 GFAAVSGASVATSAVFARIAIPEMLKIGYDKRFAAGVVAAGGTLASLIPPSAILVIYAII 181

Query: 164 LGVPVGDLFQAALWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAV 223
           +   VG L  A   PG      Y + I+  A +  +   P         R   +     +
Sbjct: 182 VEQDVGKLLLAGFIPGAFSAVVYGLLIIGMA-MTIKGFGPAVTGFTWKERLVSLPPALPI 240

Query: 224 IPPLALIVVVLGSIFAGVA--TPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVT 281
           +  +A I++ + + F G A  TPTE  A+G     L+AL Y    W+ + DA  ET K++
Sbjct: 241 LFVVATIILFVYNPFGGDAWGTPTEGGAIGAFVVFLMAL-YRGMRWAELKDALLETAKLS 299

Query: 282 AMVFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEI 341
            M+F I+ G   +     +        +W+ +L       LI  +L   +LG F+D + +
Sbjct: 300 VMIFTIIWGVLIYVRFLGFAELPAAFSDWITSLTLSPMLILICILLAYAVLGMFMDAIGM 359

Query: 342 CFIIVPILAPVAVLMD-----------------VDMTWFAILIAMNLQTSFLTPPFGFSL 384
             + +P++ P  + ++                 +   WF IL+    +   +TPP G + 
Sbjct: 360 LLLTLPVVYPAVMALNGGEYVSAAESTFGMSGPMCAIWFGILVVKMAEFCLITPPIGLNC 419

Query: 385 FYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFPS 423
           F + GV    +T  D+++GV PF +   + +  L+ FPS
Sbjct: 420 FVVAGVR-DDLTVQDVFKGVTPFFIADGITIAILVAFPS 457