Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  184 bits (468), Expect = 3e-51
 Identities = 125/431 (29%), Positives = 209/431 (48%), Gaps = 24/431 (5%)

Query: 1   MIGIVMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSI-------ME 53
           M   ++F + L  +L G P++ + G   L F        +F      I+S+       +E
Sbjct: 1   MNAAIIFGLLLALMLTGMPISISLGLTVLTF--------LFTMTQVPIESVALKLFTGIE 52

Query: 54  NTVLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVG 113
              +MA+P F+  G  L    +A +++     + G  +GG+ ++ VL   L AA +G   
Sbjct: 53  KFEIMAIPFFILAGNFLTHGGVARRMINFASAMVGHFYGGLGLAGVLACALFAAVSGSSP 112

Query: 114 ASVVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQ 173
           A+VVA+G I LP M++  +      G I  SG LG +IPPSIV+++        VG LF 
Sbjct: 113 ATVVAIGSILLPAMVRAGFPNRFGAGVITTSGALGILIPPSIVMVMYSVATNTSVGALFM 172

Query: 174 AALWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVV 233
           A + PGL+L     +     AK   +   P  P A    R     A +  +  L LIV+V
Sbjct: 173 AGVIPGLLLAFTLGMVTWYRAK---KFDYPRMPKASWGERW---VAFRKSVWGLMLIVIV 226

Query: 234 LGSIFAGVATPTESAALGGAGAILLAL-AYGQFSWSMVYDASKETVKVTAMVFAILLGAT 292
           +G I+ G+ TPTE+AA+    A ++A+  Y       +     ++  ++AM+  I+  A 
Sbjct: 227 MGGIYTGMFTPTEAAAMSAVYAFIVAVFVYKDMGLKQIPKVLLDSANMSAMLLYIITNAV 286

Query: 293 AFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPV 352
            FS   T     +L+ EW+++       FL+   +++L+ G F++   I  I+ PIL PV
Sbjct: 287 LFSFLMTNENIPQLLAEWLLDKGLGPIAFLLAVNVLLLVAGNFMEPSSIVLIMAPILFPV 346

Query: 353 AVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQI 412
           AV + +D   F ILI +N++     PP G +L+   G+    +T + I   V P++L  +
Sbjct: 347 AVKLGIDPVHFGILIVVNMEVGMCHPPVGLNLYVASGITKMGITELTI--AVWPWLLSML 404

Query: 413 LVLISLMVFPS 423
             L  +  +P+
Sbjct: 405 CFLGLVTYWPT 415