Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  172 bits (437), Expect = 1e-47
 Identities = 121/424 (28%), Positives = 210/424 (49%), Gaps = 18/424 (4%)

Query: 6   MFFVALFAL-LLGFPVAFTFG--GIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPL 62
           + F++ FAL LLG P+    G  G+A++F     G      +P  + + +    L+A+P+
Sbjct: 4   LLFLSFFALMLLGVPLGTAMGLAGLAVVFF----GDLGLMSLPTSVYTGIAKYPLLAIPV 59

Query: 63  FVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLI 122
           FV  G++ +++ +A +L+     L G   GG+A++ +LV  +L   +G   A   A+  +
Sbjct: 60  FVLAGMIFERSGVALRLVRFAVALVGQRRGGLALAAILVCMVLGGISGSGPADAAAVATV 119

Query: 123 SLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLG-VPVGDLFQAALWPGLM 181
            +P M +  Y    +   I A+G+   +IPPSIV IL   ++    V  LF A L PGL+
Sbjct: 120 MIPSMARAGYPAAFSASVIAAAGSTAILIPPSIVFILYSVLVPQASVPALFAAGLIPGLL 179

Query: 182 LVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGV 241
              A +  +L    L+ +    +    D   RQ    ALK     L   V++LG + +G 
Sbjct: 180 ---AGLALMLPAWWLSVRHGFGVAGLQDGEARQSFWSALKEASWGLLAPVIILGGMRSGA 236

Query: 242 ATPTESAALGGAGAILLALA-YGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTY 300
            TPTE+A +     + + L  Y   +W  +Y+   E+ +V+A+V  I+  A+ F+ A + 
Sbjct: 237 FTPTEAAVVAVFYGLFVGLVIYRTLNWKNIYEVLVESAEVSAVVMLIIALASVFAWAGST 296

Query: 301 TGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDM 360
            G  E +  W++ L G++   L+   L++LI G F+D V I FI +P L PV +    D 
Sbjct: 297 LGTFEALGGWLVGLSGNETAILLAVTLLLLIAGMFLDAVSILFIFMPFLLPVILHFGWDP 356

Query: 361 TWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMV 420
            WF +++ MN+     TPP   +L     +A   +         VP++L  +  ++S ++
Sbjct: 357 VWFGVILTMNVAIGQFTPPMAINLMVTSRIAGIRI------EDTVPWVLWMVGAMLSALL 410

Query: 421 FPSF 424
             +F
Sbjct: 411 LVTF 414