Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  403 bits (1036), Expect = e-117
 Identities = 200/424 (47%), Positives = 293/424 (69%), Gaps = 6/424 (1%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGI-----EMFAFMPYRIQSIMENTVLMA 59
           VMF   +  LL G+PVAF      ++FG     +      +F  +P R+  IM N  L+A
Sbjct: 11  VMFGALVLFLLFGYPVAFALAANGMVFGFIGMELGLLHPALFQALPERVFGIMANDTLLA 70

Query: 60  VPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAM 119
           +P F FMGLVL+++ +AE LL+++G+LFG + GG+A + + VG LLAA+TGVV ASV++M
Sbjct: 71  IPFFTFMGLVLERSGMAEDLLDTIGQLFGPMRGGLAYAVIFVGALLAATTGVVAASVISM 130

Query: 120 GLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPG 179
           GLISLP+ML+Y YDK LA G I ASGTL QIIPPS+VLI++ D LG  VGD+++ A+ PG
Sbjct: 131 GLISLPIMLRYGYDKRLASGVIAASGTLAQIIPPSLVLIIMADQLGKSVGDMYEGAMVPG 190

Query: 180 LMLVAAYIIYILIYAKLNPQAAMPIEPDA-DLSRRQEVVKALKAVIPPLALIVVVLGSIF 238
           L+L + Y+ Y++I   + P AA  +  +A  L   + +++ L +++PPL LI +VLG+IF
Sbjct: 191 LILTSLYVGYVVILTLIKPNAAPALPLEARSLRGAKLLMRVLTSLVPPLVLIFLVLGTIF 250

Query: 239 AGVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAF 298
            G+ATPTE  A+G +GA++LAL   + S S++  A   T K+++ V  IL+G+T F + F
Sbjct: 251 MGIATPTEGGAMGASGALILALMRKRLSVSLLKQAMDTTAKLSSFVVFILVGSTVFGLVF 310

Query: 299 TYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDV 358
               GD  VE  + +LPG + GFLIV  +++ +L FF+DF E+ FIIVP+L PVA  + +
Sbjct: 311 RAVNGDLWVEHLLTSLPGGQLGFLIVVNILVFVLAFFLDFFELSFIIVPLLGPVAEKLGI 370

Query: 359 DMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISL 418
           D+ WF +L+ +N+QTSF+ PPFGF+LFYL+ VAP S+ T DIY G VPF+ IQI+++  +
Sbjct: 371 DLIWFGVLLGVNMQTSFMHPPFGFALFYLRSVAPASIKTTDIYWGAVPFVCIQIIMVALI 430

Query: 419 MVFP 422
           ++FP
Sbjct: 431 IIFP 434