Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  176 bits (446), Expect = 1e-48
 Identities = 117/428 (27%), Positives = 212/428 (49%), Gaps = 15/428 (3%)

Query: 1   MIGIVMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMP-----YRIQSIMENT 55
           M+G+++F   +    L  PVA   GG A    L A+G+ M   +       R+ +  ++ 
Sbjct: 1   MVGLILFGGMVLLFALNAPVAVALGGAAFAAVL-AKGLTMPVGLEPMLAVQRLYAGADSF 59

Query: 56  VLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGAS 115
            L+AVPLF+  G ++    ++ +++     L G + GG+A  +V+     A  +G   A 
Sbjct: 60  PLLAVPLFMLAGELMSAGGISRRIVALADALVGHLPGGLAAVSVVSAMFFAGVSGSAAAD 119

Query: 116 VVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAA 175
             A+G I +P M++  Y   LA     A G +G IIPPSI +I+ G + G  +G LF   
Sbjct: 120 TAAVGSILIPAMIRRGYPAPLAGAVQAAGGCIGVIIPPSIPMIVFGALTGASIGRLFAGG 179

Query: 176 LWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLG 235
           + PGL++ A+ +   ++ A+   +      P+     R  +  A+++    L    ++LG
Sbjct: 180 VLPGLLMGASLVALCVVEARRTGRV-----PERRFDAR-ALWPAIRSGAWALGAPAIILG 233

Query: 236 SIFAGVATPTESAALGGAGAILLAL-AYGQFSWSMVYDASKETVKVTAMVFAILLGATAF 294
           +I  GVAT TESAA+  A A+ + L A+ +  W  +   +      +A+V  I+  A+ F
Sbjct: 234 TIIGGVATATESAAMAVAYALPVGLYAHRELRWRDLPRLALCAGVTSAVVMLIIAAASLF 293

Query: 295 SMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAV 354
                     + +  WM++L GD+   L++  L++L++G F++      + VP+L P+  
Sbjct: 294 GWVMALERLPQAIAAWMLSLSGDRIVLLLLVNLLLLVVGAFLETTAAILLFVPVLVPLLP 353

Query: 355 LMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILV 414
            + +D+    +++ +NL    LTPP G  L     +A   +    I R +VP +++ I+ 
Sbjct: 354 ALGIDLVHLGVIVVVNLAIGMLTPPLGVCLVVSCSIA--RIPLSAISRAIVPMLVVLIVD 411

Query: 415 LISLMVFP 422
           L+ +  FP
Sbjct: 412 LLLVTFFP 419