Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  182 bits (462), Expect = 3e-50
 Identities = 116/422 (27%), Positives = 218/422 (51%), Gaps = 13/422 (3%)

Query: 5   VMFFVALFALLLGFPVAFTFG--GIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPL 62
           ++F   +  LL+G P+AF+ G   IA + G     +E  A + +     +++  ++A+P 
Sbjct: 223 LLFGYFVLFLLVGVPIAFSLGLATIATVLGAGTLPLEYLAQIAF---VSIDSFPILAIPF 279

Query: 63  FVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLI 122
           F+  G+ +    L+ +LL     L G + GG+A++T++     AA +G   A+V A+G I
Sbjct: 280 FIAAGVFMGAGGLSRRLLALGDELVGALPGGMALATIVTCMFFAAISGSGPATVAAIGSI 339

Query: 123 SLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLML 182
           ++P M++  YDK  A   + ++G +G +IPPS   ++ G      VG LF A + PG++ 
Sbjct: 340 TIPAMVERGYDKFFAAAVVASAGCIGVMIPPSNPFVVYGVAAQASVGKLFLAGIVPGVLC 399

Query: 183 VAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVA 242
             A ++ +  Y  L              S  Q + +A  A++ P    V+VLG I+ G+ 
Sbjct: 400 GLA-LMAVAYYISLKKGWRGEARHRDFRSVMQAMWEAKWALLVP----VIVLGGIYGGIM 454

Query: 243 TPTESAALGGA-GAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYT 301
           TPTE+AA+    G I+    Y + +W  ++D   E+ + ++++  ++  AT F    T  
Sbjct: 455 TPTEAAAVSALYGMIVGLFIYREITWRRMWDCMVESAQTSSVIIVLMAMATLFGNIMTIE 514

Query: 302 GGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMT 361
              + +   ++ +  +K   L++  + +L +G F++ +    II PIL P+   + VD  
Sbjct: 515 QVPDHIAAMILGVTSNKIAILLLINVFLLWVGTFMEALAAIVIITPILLPLVTQVGVDPI 574

Query: 362 WFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVF 421
            F +++ +NL   F+TPP G +LF    ++  S+   D+ R   PF+L+ I +L+++   
Sbjct: 575 HFGVIMVVNLAIGFITPPVGVNLFVASSISKVSIG--DVVRAAWPFLLVMIALLMAITYI 632

Query: 422 PS 423
           P+
Sbjct: 633 PA 634