Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., TRAP dicarboxylate transporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  179 bits (453), Expect = 3e-49
 Identities = 114/420 (27%), Positives = 211/420 (50%), Gaps = 9/420 (2%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFV 64
           V+F      L +G P+A   G +A +  + A G     ++     + +++  +MA+P F+
Sbjct: 173 VLFGYFAIFLAVGVPIAIGLG-LAALATIIAAGTLPIEYIAQVAFTSIDSFPIMAIPFFI 231

Query: 65  FMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISL 124
             G+ +    L+ +LL     + G +HGG+A++T+      AA +G   A+V A+G +++
Sbjct: 232 AAGVFMGAGGLSRRLLTLADEMLGSLHGGMALATIGTCMFFAAISGSGPATVAAIGSLTI 291

Query: 125 PVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVA 184
           P M++  YDK  +   + A+G +G +IPPS   ++ G    V +G LF   + PG++   
Sbjct: 292 PAMVERGYDKYFSAAVVAAAGAIGVMIPPSNPFVVYGVSAQVSIGKLFLGGIVPGVLTGL 351

Query: 185 AYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATP 244
           A ++Y   Y+K         + +  +   +   +AL      L + V+VLG I+ G+ TP
Sbjct: 352 ALMVYSYWYSKKRGW-----KGEVRVRNLRTFTRALWDAKWALMVPVIVLGGIYGGIMTP 406

Query: 245 TESAALGG-AGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGG 303
           TE+AAL    G  +    + + +   +YD   E    +A+V  ++  AT F    T    
Sbjct: 407 TEAAALAAFYGLFVGCFIHRELNCGSLYDCIVEAAGTSAVVIVLMAMATIFGNIMTIEEV 466

Query: 304 DELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWF 363
              +   M+NL  +K   L++  ++++++G F++ +    I+ PIL P+ + + VD   F
Sbjct: 467 PTAIATAMLNLTENKIAILMLINVLLIVIGTFMEALAAIVILTPILLPIVLKVGVDPVHF 526

Query: 364 AILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFPS 423
            +++ +NL   F+ PP G +LF   GVA   +  +   + V+P I I I VL+ +   P+
Sbjct: 527 GVIMVVNLAIGFVPPPVGVNLFVASGVAHAKIEHLS--KVVMPLIAIMIGVLLLITYVPA 584