Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  152 bits (383), Expect = 2e-41
 Identities = 116/431 (26%), Positives = 207/431 (48%), Gaps = 31/431 (7%)

Query: 4   IVMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLF 63
           I++F +    + +G P+A T  G++    + A  + + + +P  + + +    L+A+P+F
Sbjct: 3   ILLFGLFAVMMFIGVPLA-TAMGLSATVAIAAAKLGLLS-VPISVYTGVAKYPLLAIPMF 60

Query: 64  VFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLIS 123
           +F G+V +++ +A +L+     L G + GG+AI++++V  +L   +G   A   A+ ++ 
Sbjct: 61  IFAGMVFERSGVALRLVNFTVALVGPLRGGLAIASIMVCMVLGGISGSGPADAAAVAMVM 120

Query: 124 LPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVL-GVPVGDLFQAALWPGLML 182
           +P M    Y K  + G I A+G+   +IPPSI  IL   ++    V  LF A L PG + 
Sbjct: 121 IPGMAAAGYPKAFSAGLIAAAGSTAILIPPSIAFILYSVLVPQASVPALFAAGLIPGFLA 180

Query: 183 VAAYIIYILIYAKLNPQAAMPIEPD----ADLSRRQEVVKALKAVIPPLALIVVVLGSIF 238
             A II         P  A+ +        D +    ++ A K  I  L   V++LG I 
Sbjct: 181 GIALII---------PAWALSVRHGFGLVGDDASCGSILIAFKEAIWGLLAPVIILGGIR 231

Query: 239 AGVATPTESAALGGAGAILLALAYGQFSWSM-----VYDASKETVKVTAMVFAILLGATA 293
           +G  TPTE+A      A+   L  G F +       +Y+   E+ +V+A+V  I+  ++ 
Sbjct: 232 SGYFTPTEAA----VAAVFYGLFVGFFVYRTLTLRGIYELLVESAEVSAVVMMIIALSSV 287

Query: 294 FSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVA 353
           F+ A +  G  E +   ++ +   +   L+  +LV++I G F+D V I FI +PIL PV 
Sbjct: 288 FAWAGSTLGAFEAMGNALIGISTSETMTLLAVVLVLIIAGMFLDGVSILFIFIPILLPVM 347

Query: 354 VLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQIL 413
                +  WF +++ M L     TPP   +L     +A   +         VP++L  +L
Sbjct: 348 THFGWNAVWFGVIMTMCLAIGQFTPPLALNLMVTTRIADIGI------EETVPWVLWFVL 401

Query: 414 VLISLMVFPSF 424
            +   M+   F
Sbjct: 402 AMTIAMLLVVF 412