Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  176 bits (445), Expect = 2e-48
 Identities = 124/452 (27%), Positives = 215/452 (47%), Gaps = 43/452 (9%)

Query: 6   MFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVF 65
           +F   L  + LG P+A   G  +++  L+     + +      +S  E+  L+A+P F+ 
Sbjct: 6   LFTALLVCMFLGMPIAIALGFSSMLTILFFSNDSLASVALKLYESSSEHYTLLAIPFFIL 65

Query: 66  MGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISLP 125
               L    +A ++++      G I GG+A+++V+   L AA +G   A+V A+G I + 
Sbjct: 66  SSAFLSTGGVARRIIDFAMDSIGHIRGGLAMASVMACMLFAAVSGSSPATVAAIGSIVIV 125

Query: 126 VMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVAA 185
            M+K  Y +  A G I  SGTLG +IPPSIV+++      V    +F A L PGLM+   
Sbjct: 126 GMVKAGYPEKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGLMMGFL 185

Query: 186 YIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATPT 245
            +I I I A+     + P         +Q  + + KA +  LALI++VLGSI+ GVA+PT
Sbjct: 186 LMIVIYIVARFKNLPSRPFP-----GFKQLGISSAKA-LGGLALIIIVLGSIYGGVASPT 239

Query: 246 ESAALGGAGAILLA--------------------------------LAYGQFSWSM---V 270
           E++A+    A  +A                                +A G     +   +
Sbjct: 240 EASAVACMYAYFIAVFGYRDIGPLKNVAWRNPNEPIPSAIVRNLGHMALGLIKTPIDKEI 299

Query: 271 YDASKETVKVTAMVFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVIL 330
               ++  KV+ M+  I+  A  F+   T      ++ E ++ +    WGFLI+  L++L
Sbjct: 300 RHVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAEHIVGMGLPAWGFLIIVNLLLL 359

Query: 331 ILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGV 390
             G F++   I  I+ PIL P+A  + +D     I++ +N++   LTPP G +LF   G+
Sbjct: 360 AAGNFMEPSAIVLIMAPILFPIATHLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVTAGI 419

Query: 391 APKSVTTMDIYRGVVPFILIQILVLISLMVFP 422
             +S+    + + V+P++ + +  L  +   P
Sbjct: 420 TGRSIGW--VIQSVLPWLALMLAFLALITYVP 449