Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., TRAP-type mannitol/chloroaromatic compound transport system, small permease component from Pseudomonas stutzeri RCH2

 Score =  107 bits (266), Expect = 2e-28
 Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 7   VERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGI 66
           + R  +RL   +G  S+ L++ ++  V+ +V  R+A +  SIA +EL WHLF    +L +
Sbjct: 21  ISRPLDRLLVAIGEASAWLWLAVLLVVLANVFSRFALSRGSIALEELSWHLFGAALMLAL 80

Query: 67  PYAIKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGET 126
            YA+    HVRVD+  ER S+++QA I+++  L   LP  +L++   I +A ++Y   E 
Sbjct: 81  AYAVVRDDHVRVDVLRERFSLRSQAWIELIAILLLALPVIVLMIDALIPYAYKAYLYNER 140

Query: 127 SGDPGGLPYRWIIKAMIPLSFTFMAISGVGLIIHSLNKVFN-PRLMHA 173
           S  P GLPYR+I K+++P+    +A++ +   +     +FN PR + A
Sbjct: 141 SQAPSGLPYRFIFKSVLPIGLVLVALALLSRALRCSTLLFNFPRALTA 188