Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., TRAP transporter small permease subunit from Rhodopseudomonas palustris CGA009

 Score =  100 bits (250), Expect = 1e-26
 Identities = 55/162 (33%), Positives = 93/162 (57%), Gaps = 1/162 (0%)

Query: 1   MRSLIYVERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFAT 60
           MR+L+ + R  +  + ++G   S L +  VA    + V+R  F+  S +F EL+W LF+ 
Sbjct: 1   MRALLGLSRTIDAFNTVVGRWVSWLIVAAVAISAVNAVVRKLFDMSSNSFLELQWVLFSV 60

Query: 61  VFLLGIPYAIKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKES 120
           VF+L  P+ + +  H+R+D+    L +K +  ID++G +FFL+PF ++++++ I F   S
Sbjct: 61  VFMLCSPWTLLSNEHIRIDIINHSLPLKVRGWIDMIGHVFFLMPFAIILLWWSIPFFLVS 120

Query: 121 YALGETSGDPGGLPYRWIIKAMIPLSFTFMAISGVGLIIHSL 162
           Y   E S   GGLP +W  KA+I +    + I G+  II  L
Sbjct: 121 YHQNEQSFSAGGLP-QWPAKALIMIMCVLLIIQGISEIIKRL 161