Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) from Phaeobacter inhibens DSM 17395

 Score = 48.5 bits (114), Expect = 8e-11
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 10  LFNRLSD-LLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGIPY 68
           L N L + L+ LL  ++ ++  ANVV     R+ FN   +   EL   LFA + LLG  Y
Sbjct: 11  LINTLEETLIALLLGLMTLITFANVV----ARFVFNSNILWALELTVFLFAWLVLLGASY 66

Query: 69  AIKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGETSG 128
           A+K   H+ VD     +S  A+ VI ++ ++   L F LL++    D+      L  TSG
Sbjct: 67  AVKVHAHLGVDAILNMVSPGARRVIGLI-SVGCCLVFSLLLLKGAYDYWAVFADLPPTSG 125