Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., tripartite ATP-independent periplasmic transporter DctQ (RefSeq) from Shewanella sp. ANA-3

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 4/118 (3%)

Query: 7   VERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGI 66
           + R+F    +  G+L+ +L  L+   V  +VV R+ FN   +  QEL   L     L G+
Sbjct: 2   ISRIFGYFEE--GVLN-LLITLMTLLVFTEVVARFFFNTGFLWIQELTLTLCGWFVLFGM 58

Query: 67  PYAIKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALG 124
            Y +K G H+ VD F + L  KA+ +  ++ T    L +C L +    ++  + Y +G
Sbjct: 59  SYGVKVGAHIGVDAFVKNLPPKAKKITSLV-TALICLAYCGLFLKGSWEYLSQMYQIG 115