Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  258 bits (658), Expect = 2e-73
 Identities = 135/327 (41%), Positives = 191/327 (58%), Gaps = 3/327 (0%)

Query: 43  KVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSG 102
           K Y   +   W  N+P  G   + +A   + MS+GRL I++ +A +    L VFD V  G
Sbjct: 41  KTYTWKMVTAWPKNYPGLGTAAERLADRVKVMSDGRLTIKVYAAGELVPALEVFDAVSRG 100

Query: 103 QYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGGGMELMEKVYSPHNMLSFP 162
             ++GH A+YYWKGKVP   +FTS+PFG++  E  AW   G G +  E+ Y+P  +    
Sbjct: 101 TAELGHGAAYYWKGKVPTAQFFTSVPFGLSAIEMNAWLSRGEGQKFWEEAYAPFGVKPMV 160

Query: 163 GGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAPGELYTSLERRT 222
            GNT +QMGGW+ KEIN++ DL+GLK+R+PG  GEVLA LGA   N+  GE++T+L+   
Sbjct: 161 VGNTGMQMGGWYNKEINALGDLRGLKIRMPGLGGEVLARLGATTVNLPGGEVFTALQTGA 220

Query: 223 IDALEWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFLVNQKTWDKLPEDLREILRVAM 281
           IDA +WV P  DL  G HK A  YYY GW EP   L+ LVNQK  D LPEDL+ IL  A 
Sbjct: 221 IDATDWVSPYNDLAFGLHKAAKYYYYPGWQEPQAVLELLVNQKAMDTLPEDLQAILTEAT 280

Query: 282 RTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLA 341
           R A+ DM    V+ +      + Q+   V++K FP  V+ A++E ++ +L + AA+  L 
Sbjct: 281 RAASRDMMDDYVYNNALALEQLKQQ--GVELKRFPDEVLDAMQEQSELVLGELAAQSELN 338

Query: 342 KEIQESQANYLKQTRSWTDISLRAYLN 368
             I  S   + +Q +   +IS +   N
Sbjct: 339 GRIWASMKAFQEQVKPMHEISEKELYN 365