Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  271 bits (693), Expect = 2e-77
 Identities = 147/367 (40%), Positives = 205/367 (55%), Gaps = 21/367 (5%)

Query: 20  MKRSVLLIAAGVALLTT----------------SAFAEEKVYRLTLAETWGPNFPIFGDT 63
           MKR  +L AAGV L  T                S  AE++ +   +  +W  NFP  G  
Sbjct: 1   MKRRDILTAAGVGLAATALAGCNDKSDKPVAGESKQAEQQTFNWKMVTSWPKNFPGVGVG 60

Query: 64  TKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLY 123
            +  A +  +MS GRL+I++ +A +    L VFD V  G  +MGH A YYWKGKVP   +
Sbjct: 61  AERFANLVNEMSGGRLKIKVYAAGELVPALEVFDAVSRGTAEMGHGAPYYWKGKVPAAQF 120

Query: 124 FTSMPFGMTTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVED 183
           F ++PFG    E  AW + GGGM+L E+VY P+ +L    G T VQ  GWF KEINSV+D
Sbjct: 121 FCALPFGPNAQEMNAWLHRGGGMQLWEEVYKPYGVLPMACGATGVQTAGWFNKEINSVDD 180

Query: 184 LQGLKMRIPGFAGEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIA 243
            +GLKMR PG  GEVL ++G    N+  GE++T+L+   IDA EW+GP  DL +G HK +
Sbjct: 181 FKGLKMRTPGLGGEVLTKMGGTVVNMPAGEIFTALQTGAIDATEWIGPYNDLALGLHKAS 240

Query: 244 PYYYT-GWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVS 302
            YYYT GW EP    +  VN K WD LP+DL+ I+R A R    DM       + KN  +
Sbjct: 241 KYYYTPGWQEPNVTFELDVNLKAWDTLPDDLKAIVRAAARDVNGDMLDD---YNAKNMEA 297

Query: 303 ITQ-EFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDI 361
           + Q     V+V+  P  V+  L+EV   ++   A  DP+A ++ E Q+ YLK+   + ++
Sbjct: 298 LEQLREQGVEVRRLPDEVLARLKEVAAEVVDASAKADPVASKVWEQQSAYLKRLYDYAEL 357

Query: 362 SLRAYLN 368
           + +   N
Sbjct: 358 NEKDIYN 364