Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 21/306 (6%)

Query: 20  MKRSVLLIAAGVALLTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRL 79
           +KR +L+ A   A   +          L +AE     +P      +N+    E  +NG +
Sbjct: 3   LKRKLLVTALPFAFCISGL---AHAMTLKIAEIHPAGYPTVV-AMENLGKKLETATNGEI 58

Query: 80  QIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAW 139
           + R+ +     +   V +  + G   +   +       VP T  F +MPF     +    
Sbjct: 59  KSRMFAGGVLGSEKEVIEQTQIGAVQLTRVSLGSVGPVVPATNVF-NMPFVFRDIDHMRK 117

Query: 140 FYHGG-GMELMEKVY-SPHNMLSFPGGNTDVQMGG---WFQKEINSVEDLQGLKMRIPG- 193
              G  G E+++ +  S  NM+    G   ++ G    + +K I  +EDL+G+K+R+ G 
Sbjct: 118 VVDGEIGQEILDAITNSDFNMV----GLAWMEAGSRSLYTKKPIRRIEDLKGMKIRVIGN 173

Query: 194 -FAGEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHE 252
               + L  +GA    +  GE++++L+   ID  E   P+L L     ++A  +YT  H 
Sbjct: 174 PLFIDTLNAMGANGIAMDTGEIFSALQSGVIDGAENNSPTL-LEHNHFRVAK-HYTQTHH 231

Query: 253 PATELQFLVNQKTWDKL-PEDLREILRVA--MRTAAYDMYVQSVHESGKNWVSITQEFPD 309
                  L+++ TW+KL PE    + ++A   +    D++V     S +   +   EF +
Sbjct: 232 LILPEPLLMSKDTWNKLSPEQQATVKKLAKEAQLEERDLWVAKETASNEKLKAEGVEFIE 291

Query: 310 VKVKTF 315
           V  K F
Sbjct: 292 VDTKPF 297