Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  179 bits (453), Expect = 1e-49
 Identities = 107/339 (31%), Positives = 176/339 (51%), Gaps = 22/339 (6%)

Query: 30  GVALLTTSAFAEEKV-YRLTLAETWGPNFP--IFGDTT--KNMAAMAEKMSNGRLQIRID 84
           G +LL+  A A EK+ +++ LA      FP  + G +T  K+++   + +S G +Q+R  
Sbjct: 21  GASLLSGVASAAEKIRWQVPLA------FPSHLIGLSTPVKHLSESLKAVSGGDIQLRYY 74

Query: 85  SANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGG 144
              +   P  + D V SG+Y  G++   Y +G +P    ++  PF M      AW+Y G 
Sbjct: 75  EPGELVPPFEIMDAVSSGKYPAGYTWIGYDQGTIPALPLYSGAPFNMEPPAHLAWYYQGD 134

Query: 145 GMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGA 204
           G +L+E++Y+  N+          +  GWF K I  +ED  GL++R  G  G+VL +LGA
Sbjct: 135 GKKLLEEIYAQRNIHPMLCSIIGPEGAGWFAKPIEKLEDFDGLRIRFAGIGGKVLEKLGA 194

Query: 205 KPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFLVNQ 263
             T +  GE+Y +LER+TIDA E+  P++D  +G  +I   Y   GWH+  T    LVN+
Sbjct: 195 SVTMVPGGEIYQALERKTIDATEFSQPAVDKMLGLDQIIKNYIMPGWHQTLTTSHLLVNK 254

Query: 264 KTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSIT----QEFPDVKVKTFPAPV 319
             WDKL  + R ++ +   +A    + +S       W   T     +   VK +  P PV
Sbjct: 255 DVWDKLKPESRALIEMGCESATLKGFAES------EWAQPTALRDYQKQGVKAQVLPEPV 308

Query: 320 IKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSW 358
           ++ L++V D++L + AA+D + K +  SQ  ++K    W
Sbjct: 309 LRELQKVTDKVLDEMAAKDEMFKRVLTSQREFMKHHSIW 347