Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  151 bits (381), Expect = 3e-41
 Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 7/336 (2%)

Query: 28  AAGVALLTTSAFAEEK-VYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSA 86
           AAG A+    +    +    +    TW P+  IF +   + A     M+ G L+I +  A
Sbjct: 21  AAGAAMAAAPSIVRAQGPVSMRWQSTW-PSKDIFHEFALDFAKKVNDMTGGDLKIEVLPA 79

Query: 87  NKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMP-FGMTTGEQYAWFYHGGG 145
                  G+ D V  G  D GH    Y  GK      + S P F M      AW  +GGG
Sbjct: 80  GAVVPAFGLLDAVSEGTLDGGHGVMVYHYGKQTALALWGSGPGFAMDANMMLAWHKYGGG 139

Query: 146 MELMEKVYSP--HNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELG 203
            +L+ K+Y     N++SFP G    Q  GWF+K +   EDLQGLK R  G + +V   LG
Sbjct: 140 RDLLAKLYESIGANVVSFPYGPMPTQPLGWFKKPVAKAEDLQGLKFRTVGISIDVFTGLG 199

Query: 204 AKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPY-YYTGWHEPATELQFLVN 262
           A    +  GE+  +L+R  +DA E+   S D  +GF  ++      G+H+ A   + L N
Sbjct: 200 AAVNALPGGEIVAALDRGLLDAAEFNNASSDRLLGFPDVSKVCMLQGYHQNAETFEILFN 259

Query: 263 QKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKA 322
           +  +D LP+ ++ I+  A+  A+ DM  +++     ++  + Q    VK    P  ++K 
Sbjct: 260 KGKFDGLPDQMKAIISNAVDAASADMAWKAIDRYSTDYREM-QTADQVKFYKTPEAILKR 318

Query: 323 LREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSW 358
             EV D ++ K +AE+P+ KE+ +SQ  + ++   W
Sbjct: 319 QLEVYDEVVKKKSAENPVFKEVLQSQIAFAERATRW 354