Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 68/278 (24%), Positives = 113/278 (40%), Gaps = 38/278 (13%)

Query: 18  RVMKRSVLLIAAGVAL---LTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKM 74
           ++ +R++LL    VAL   + T A A +  Y+L        N P+       +   A+K+
Sbjct: 2   KMTRRTMLLGTGAVALGASIRTKAHAADFTYKLA------NNLPVTHPLNIRLKEAADKI 55

Query: 75  ---SNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGM 131
              + GRL+I I  +++          +++G  +    +       VPN    + + F  
Sbjct: 56  LEETGGRLKINIFPSSQLGNDTETLSQLRNGATEFFSLSPLILSTLVPNAA-ISGIGFAF 114

Query: 132 TTGEQYAWFYHGGGM------ELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQ 185
              +   W    G +      E+ +K   P   + +  G   +       K IN+ EDL+
Sbjct: 115 PDYDT-VWKAMDGELGAYARGEIEKKGLVPMEKI-WDNGFRQITSSN---KPINTPEDLK 169

Query: 186 GLKMRIPGFA--GEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIA 243
           G K+R+P       +    GA PT I   E+YT+L   T+D  E   P     +     A
Sbjct: 170 GFKIRVPPSPLWQSMFTAFGAAPTTINFAEVYTALSTGTVDGQE--NP-----LAIASTA 222

Query: 244 PYYYTGWHEPATELQF-----LVNQKTWDKLPEDLREI 276
             Y    H   T   +     L N++ W+ LPED+REI
Sbjct: 223 KLYEVQKHCAMTNHMWDGFWMLANKQAWETLPEDIREI 260