Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score =  196 bits (499), Expect = 6e-55
 Identities = 105/327 (32%), Positives = 167/327 (51%), Gaps = 4/327 (1%)

Query: 47  LTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDM 106
           LT+  TW  ++   G++   +AA    MS GRL I + +A +       F+ V +G  D+
Sbjct: 35  LTMVTTWPKDYVGLGESASRLAARVRTMSGGRLSITVYAAGELVPAFEAFEAVANGTADL 94

Query: 107 GHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNT 166
            H A  YW+ +     +F ++PFG+T  E  AW +HGG   L + + +P+ +       T
Sbjct: 95  YHGAETYWESRSSAFNFFCAVPFGLTAIETSAWIHHGGAQALWDALSAPYGIKPMLASAT 154

Query: 167 DVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAPGELYTSLERRTIDAL 226
            VQMGGWF KEI  VED +GL+MRIPG    +L E+GA P  +   +++ +L    IDA 
Sbjct: 155 GVQMGGWFNKEIKRVEDFKGLRMRIPGLGARILKEVGAVPVALPGSQIHDALRDGAIDAA 214

Query: 227 EWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTA- 284
           EW+GP  DL +   K+A  YYY G+HEP T L   +N   W  L +  R I+  A     
Sbjct: 215 EWIGPWSDLALDLQKVARYYYYPGFHEPGTSLAVGINLGVWRGLSDQERAIIEAACGAEH 274

Query: 285 AYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLAKEI 344
           A+ +   +          +T     V+++ FP  V+  L +   R++   AA+ P  + I
Sbjct: 275 AFSLAEYNARNGDALHTLVTNH--GVQLRAFPTQVLLELGKTAGRVVRAAAADSPETRRI 332

Query: 345 QESQANYLKQTRSWTDISLRAYLNSES 371
            +    + ++  +W  +S +A+ N+ S
Sbjct: 333 YDHYTAFRRKALTWAQLSDQAFWNARS 359