Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

 Score = 63.5 bits (153), Expect = 8e-15
 Identities = 71/336 (21%), Positives = 130/336 (38%), Gaps = 29/336 (8%)

Query: 27  IAAGVALLTTSAFAEEKVYRLTLAETWG----PNFPIFGDTTKNMAAMAEKMSNGRLQIR 82
           + A  A L T A A+ K+       TW         +     K    M  K++  R+QI 
Sbjct: 13  VGALAAPLATPALAQSKI-------TWRMQTYAGAALAEHVVKPAIDMFNKIAGDRMQIE 65

Query: 83  IDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYH 142
           +  A++      +F  ++ G  D   S           T++    PF           ++
Sbjct: 66  LYYADQLVPTGELFRAMQRGTIDAVQSDDDSMASPTDVTVFGGYFPFASRYSLDVPVLFN 125

Query: 143 GGGM-ELMEKVYSPHNMLSFPGGNTDVQMGGW------FQKEINSVEDLQGLKMRIPGFA 195
             G+ E+ ++ YS         G   +  G W       +  I S+ DL+G ++     A
Sbjct: 126 KYGLNEIWDEEYSKV-------GVKHISAGAWDPCHFATKDPIRSLADLKGKRVFTFPTA 178

Query: 196 GEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPAT 255
           G  L++ G  P  +   ++  +++   +D + W G + D  +G+  +  Y+ T     A 
Sbjct: 179 GRFLSQFGVVPVTLPWEDIEVAMQTGELDGIAWSGITEDYTVGWADVTNYFLTNNISGAW 238

Query: 256 ELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTF 315
              F  NQ  W++LPEDL+ + RV    + Y  Y Q  +  G+    +    P +++ + 
Sbjct: 239 AGSFFANQGRWNELPEDLQTLFRVCCDQSHY--YRQWWYWGGE--ADLRVNGPKMELTSI 294

Query: 316 PAPVIKALREVNDRLLAKHAAEDPLAKEIQESQANY 351
           P      + +   +   + AAE P    + E    Y
Sbjct: 295 PDEEWATVEDAAYKFWDEIAAESPTKARVVEIIKKY 330