Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Dechlorosoma suillum PS

 Score =  226 bits (576), Expect = 8e-64
 Identities = 126/343 (36%), Positives = 194/343 (56%), Gaps = 11/343 (3%)

Query: 27  IAAGVALLTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKN----MAAMAEKMSNGRLQIR 82
           +AAG  + TT A       + T+      +FP   DT       +A     M+ G+  IR
Sbjct: 12  VAAGAGVATTVAAPAIAQSQPTIKWRLTSSFPKSLDTIYGGADVLANRLRAMTGGKFDIR 71

Query: 83  IDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYH 142
           + +  +    L   D V+ G  +M H+ SYY+ GK     + TS+PFGM   +  AW Y+
Sbjct: 72  VFAGGEIVPGLQALDAVQQGTVEMCHTCSYYYVGKDKTFGFGTSVPFGMNPRQMNAWIYY 131

Query: 143 GGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAEL 202
           GGG +L+++ Y+ +N++SF GGNT  QMGGWF+KEI +++D++GLKMRI G  G V   L
Sbjct: 132 GGGQKLLDEFYANYNVVSFAGGNTGTQMGGWFRKEIKTLDDVKGLKMRIAGLGGAVFERL 191

Query: 203 GAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFLV 261
           GA P  IA  ++Y +LE+ TIDA EWVGP  D ++GF K+A  YYY GW EP   + F V
Sbjct: 192 GAVPQQIAGSDIYPALEKGTIDAAEWVGPYDDEKLGFFKVAKNYYYPGWWEPGPTIHFFV 251

Query: 262 NQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHE-SGKNWVSITQEFPD-VKVKTFPAPV 319
           N+K WDKLP++ +E    A + AAY+  V  + E   KN  ++++     VK++ +P  V
Sbjct: 252 NKKEWDKLPKEYQE----AFQAAAYEANVTMLAEYDHKNPTALSRLLSQGVKLQKYPDAV 307

Query: 320 IKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDIS 362
           ++A  +    L  + +A++P  K++      Y +   +W  ++
Sbjct: 308 LEAAYKAAMDLYTEESAKNPAFKKVWTEYDKYRRTQNAWFSVA 350