Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., TRAP-type D-lactate transporter, periplasmic component (from data) from Marinobacter adhaerens HP15

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 56/228 (24%), Positives = 114/228 (50%), Gaps = 10/228 (4%)

Query: 72  EKMSNGRLQIRIDSANKHKAPLG-VFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFG 130
           E  S G L+ +   A    A    +FD V++G     +  + YW GK+P +++ +S P G
Sbjct: 94  EAKSGGELKFQCFPAKAVAADNNALFDAVRNGVLQGMNPFTLYWAGKIPASVFLSSYPAG 153

Query: 131 MTTGEQY-AWFYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKM 189
                Q+   FY  G +E   ++Y    +        D  +    ++ +NS++DL+G+K+
Sbjct: 154 PDQPHQWDTMFYSMGMLEKTREIYKKFGLFYVGPIQHDANIIH-SKQPVNSLDDLKGMKI 212

Query: 190 RIPG-FAGEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYT 248
           R+PG    EV  + G    ++   +++ +LE+ TIDA ++VGP+++  +GF ++  Y   
Sbjct: 213 RVPGGMVAEVFQQFGVSTVSLPGSDIFPALEKGTIDAADFVGPAVNYELGFSQVTDYIIF 272

Query: 249 G------WHEPATELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYV 290
           G       ++P   +   V+ + W+ +  +L++++   +R  +   Y+
Sbjct: 273 GPPGVMSIYQPVDLMDLTVSLRAWNSISPELQQLVEDEVRIYSQKHYL 320