Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., extracellular solute-binding protein, family 7 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  264 bits (674), Expect = 3e-75
 Identities = 131/332 (39%), Positives = 198/332 (59%), Gaps = 3/332 (0%)

Query: 36  TSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGV 95
           T A   ++V    LA +W  NFP  G   +  A +   MS+G+L+I +  A +      V
Sbjct: 35  TDAPPVKQVIEWRLATSWPKNFPGLGMAPERFATLVNDMSHGQLRITVHGAGELMPAFAV 94

Query: 96  FDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGGGMELMEKVYSP 155
           FD V  G+  M H+ASYYWKGK P + +F+S+PFGMT  E   W  H GGM L E+VY P
Sbjct: 95  FDGVSQGKIQMAHAASYYWKGKTPASQFFSSIPFGMTAQEMNGWL-HYGGMALWEEVYRP 153

Query: 156 HNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAPGELY 215
             ++   GGNT +QMGGWF K IN++ D +GLK+R+PG  GEVL  +GA P N+A  EL+
Sbjct: 154 FGIIPLAGGNTGMQMGGWFNKPINTIADFKGLKIRMPGLGGEVLKRVGAVPVNMAGRELF 213

Query: 216 TSLERRTIDALEWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFLVNQKTWDKLPEDLR 274
           ++L+  ++DA EWVGP  DL  G HK+A  YYY GWHEP + ++FL+N+  ++ LPEDL+
Sbjct: 214 SALQTGSLDAAEWVGPVNDLAFGLHKVAKYYYYPGWHEPGSNMEFLINKAAFESLPEDLQ 273

Query: 275 EILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLLAKH 334
            +++ A R    DM  +    +     ++ +E   V+++ FP  V+  L  ++ +++ + 
Sbjct: 274 TVVKTAARAINQDMLDEYTTSNVTALETLVKE-EGVELRAFPPAVLTELERISHQVIGEQ 332

Query: 335 AAEDPLAKEIQESQANYLKQTRSWTDISLRAY 366
           A +DP+  ++  +   Y +  R +  IS  AY
Sbjct: 333 AEQDPMMGKVYRAYHAYEQGVREYHKISEDAY 364