Pairwise Alignments

Query, 182 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 187 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score =  142 bits (358), Expect = 3e-39
 Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 4/178 (2%)

Query: 4   TRRDFLKLTAGGLILAACTPSIAFASYAAK-PRELALSNLHTGESIETRYFNGKNYVRSE 62
           TRR F+ L  G +  AA     AFAS  +   R L+L NLHTGE I+  Y+    YV   
Sbjct: 12  TRRSFIGLCTGAV--AALHAPAAFASRRSTIERSLSLENLHTGERIKRVYWANGRYVPDS 69

Query: 63  LKRLNHLCRDFRRDEVHAMDKLLFDQLCQIQLLLGTQAEVHIVSGYRSPATNKQLR-SKS 121
           L+ ++H+ RDFR  +V  +D+ L D L ++   + T+A   ++SGYRSP TN  LR +  
Sbjct: 70  LREIDHVLRDFRTGDVLPIDRGLLDLLYELHATMETRAPFRVISGYRSPRTNALLRETGG 129

Query: 122 KGVAKKSYHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSQFIHIDTGPVRQW 179
            GVAK+S HM G AID  L   ++ ++R  A+ L+ GGVGYYP+S F+H+D G VR W
Sbjct: 130 GGVAKQSLHMRGMAIDIALKDRTISQLRRGALGLRRGGVGYYPESGFVHVDVGKVRSW 187