Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  171 bits (432), Expect = 7e-47
 Identities = 101/309 (32%), Positives = 163/309 (52%), Gaps = 13/309 (4%)

Query: 211 EALVQRLALVNLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVT 270
           + L QRL +++ D        + +D+ ++  +K+FQ  HGL  DGVIG  ++K +N   +
Sbjct: 116 QQLRQRL-MISGDLPQSAGISSSFDSYVDGAVKRFQARHGLPADGVIGEYSLKAMNVDAS 174

Query: 271 ERLALLALNAERIRLWPTQQDSM-IVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVM 329
            RLA L  N  R++          ++VN+P   ++  + GR       +VGK  R +P++
Sbjct: 175 TRLAQLETNLVRLQSMSGDLGRRYVMVNIPAAYIEAVENGRVALRHTAIVGKIDRQSPIL 234

Query: 330 NTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWE 389
           N+K+  +I+NP W  P  I+ +DI+P++++D  YLA + + ++ G  +   + P  IDW+
Sbjct: 235 NSKIYEVILNPYWTAPRSIIQKDIMPLMRKDPTYLARNAIRLLDG--NGNEVSPETIDWQ 292

Query: 390 AVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVE 449
           A +     +  RQ  G  NA+ + K N  N  A+Y+HDTP + LFN   R  SSGC+RV+
Sbjct: 293 AEKAPNLMF--RQDPGKINAMSSTKINFHNEHAVYMHDTPQQGLFNKLMRFESSGCVRVQ 350

Query: 450 NAEKFAQTLL------ANQGITLDDFPVSTQAIALKKRIPVHIIYQTVW-YEEGVLHYRD 502
           N    +  LL      A Q I           I L + +PV+  Y T W  ++ V+ +RD
Sbjct: 351 NVRDLSTWLLKETPGWARQQIEATIKSGVNTPIKLAEEVPVYFTYITAWSAKDRVVQFRD 410

Query: 503 DIYHYDALA 511
           DIY  D  A
Sbjct: 411 DIYQRDGAA 419