Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., ErfK/YbiS/YcfS/YnhG (NCBI) from Rhodospirillum rubrum S1H

 Score =  159 bits (402), Expect = 3e-43
 Identities = 123/373 (32%), Positives = 182/373 (48%), Gaps = 25/373 (6%)

Query: 167 TPQDPAYQQLLQAYQSLSSIEFNEVALYEQMERLKRPGDPLSHREALVQRLA----LVNL 222
           TPQ    +Q L  YQ+L+        L +      +PGD       + +RLA    +V  
Sbjct: 225 TPQYDLLRQGLVRYQALARDGGWPTDLADGASI--KPGDRDPRLPEMRRRLAAEGLVVGS 282

Query: 223 DTTSI-LNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAE 281
           D T I   D    D  L + ++ FQ  HGL  DGVIG  T+  +NT+  +R+  + +  E
Sbjct: 283 DPTFIGPPDAELLDDFLVEAVRIFQAAHGLSADGVIGRGTLVDMNTTPAQRITQIRVALE 342

Query: 282 RIRLWPTQQ-DSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINP 340
           R RL P     + ++VNVP + +   +    V   +V VG+    TP+ +  L  +  NP
Sbjct: 343 RWRLLPRALGQTHLLVNVPQYQLYLNEGRTTVLSMRVAVGRQDFETPLFSDTLRYMEFNP 402

Query: 341 TWNVPHKIMVEDILPMVKRDSEYLANHHMEI----IRGWSDPEVIDPALIDWEAVEPETF 396
            WNVP  I   +++P    +S YLA     +    + GW D   +    +DW+A    + 
Sbjct: 403 YWNVPISIAQAEVIPKQIENSAYLAKKGFTVLPRGVEGWDDG--VGHESVDWKADAARS- 459

Query: 397 PYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQ 456
            YRLRQ  G  N LGT KF  PN  A+YLHDT S+ +F+ ++RA S GC+RV+     A 
Sbjct: 460 -YRLRQDPGPANPLGTVKFMFPNEYAVYLHDTNSRGVFDRSARAVSHGCVRVQEPALLAN 518

Query: 457 TLLA----NQGITLDDFPVST-QAIALKKRIPVHIIYQTVW-YEEGVLHYRDDIYHYDAL 510
            +L       G T  DF   T + + L + +P+H++Y T W  E G + +  DIY  D  
Sbjct: 519 YILERFTDRIGKTAADFSGPTPKVVRLNRPLPIHLVYITAWGGEGGKVAFVRDIYAKDRA 578

Query: 511 ---ALGNGDASPN 520
              AL +  ASP+
Sbjct: 579 IRQALHDTAASPD 591