Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., L,D-transpeptidase from Klebsiella michiganensis M5al

 Score =  266 bits (681), Expect = 1e-75
 Identities = 160/502 (31%), Positives = 252/502 (50%), Gaps = 34/502 (6%)

Query: 50  IYHSNNDQLLWSDLATANHFEAQLEVIHRASFSPLFSRQLFALKSYRQQDRWHEYDVLAT 109
           +Y + + + +W +      F+ QL  +  A F P F+  +  L            DV+ +
Sbjct: 101 LYAARDMKPMWDNREAVQAFQQQLAEVAIAGFQPQFTTWVELLTDPAVNGLAR--DVVLS 158

Query: 110 DTLLQYLSYAEQAPKVGIAWFFEGQLDQPLAPPSEEAQLALHMAIGNQSLARLMDEYTPQ 169
           D ++ YL +    P  G  W + G     ++ P         +A+ N SL + +    PQ
Sbjct: 159 DAMMGYLHFISGIPTQGNRWLY-GTKPYAMSTPPLSVINQWQVALDNGSLPQFIAGLAPQ 217

Query: 170 DPAYQQLLQAYQSLSSIEFNEVALYEQMERLKRPGD---------PLSHREALVQRLALV 220
            P Y  + QA   L+ +  +        +   RPG+          +  R  ++   A +
Sbjct: 218 HPQYAAMHQAL--LAQVADSRPWPQLTSKTSLRPGEWSNDAGALREILQRTGMLDESAKI 275

Query: 221 NLDTTSILNDVA----------YYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVT 270
            L    +++  A           YD  L + +K+FQ   GL  DGVIG  T  WLN S  
Sbjct: 276 ALPGDEVVSPSAGKKAKNSGRGVYDRQLVEGVKRFQAWQGLGADGVIGQATRDWLNVSPA 335

Query: 271 ERLALLALNAERIRLWPTQQDSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMN 330
           +R  +LALN +R+RL P    + I+VN+P F + Y+  G +V  S+V+VG+  R TP+M+
Sbjct: 336 QRAGVLALNIQRLRLLPGNLATGIMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMS 395

Query: 331 TKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEA 390
           + L+++++NP WNVP  +   DILP V+ +  YL  H   ++RGW+  E IDP  +DWE 
Sbjct: 396 SALNNVVVNPPWNVPPTLARNDILPKVRNNPGYLEQHGYTMMRGWNSKETIDPYQVDWET 455

Query: 391 VEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVEN 450
           +     P+R +Q  G +N+LG YKFN P+S AIYLHDTP+ +LF    RA SSGC+RV  
Sbjct: 456 ITASNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDGRALSSGCVRVNK 515

Query: 451 AEKFAQTLLANQGITLDDFPVS-------TQAIALKKRIPVHIIYQTVWY-EEGVLHYRD 502
           A + A  LL + G   +D  +S       T+ + +++ IPV++ Y T +   +G   YR 
Sbjct: 516 ASELANMLLQDAG--WNDARISDALKQGNTRYVNIRQNIPVNLYYLTAFVGADGRTQYRT 573

Query: 503 DIYHYDALALGNGDASPNLTKI 524
           DIY+YD  A  +    P   ++
Sbjct: 574 DIYNYDLTARSSAQILPKAEQL 595