Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., peptidase from Cupriavidus basilensis FW507-4G11

 Score =  143 bits (361), Expect = 1e-38
 Identities = 128/406 (31%), Positives = 185/406 (45%), Gaps = 41/406 (10%)

Query: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQL---LQAYQSLSSI 186
           G + +  AP  +   ++   L  AI  Q L   + +  P  P Y  L   L  Y++L+  
Sbjct: 112 GTIHEKFAPAPDRQFDSSRLLRAAIAGQDLPEAVRQAAPSFPLYASLRAALSRYRALAGH 171

Query: 187 EFNEVALYEQMERLKRPGDPLSHREALVQRLALVNLDTTSILNDVAYYDASLEKPIKQFQ 246
              +  L     R   PG   +    L QRL  +  D  +      +Y   L + IK FQ
Sbjct: 172 PAWQAPLPPLPGRKLVPGQAYAGLPVLAQRLIALG-DLPAATPVPQHYQGELVEGIKAFQ 230

Query: 247 KMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDS-MIVVNVPGFDMKY 305
             HGL  DG IG  T   LN  +  R+  + L  ER+R  P  +   MIVVNVP F ++ 
Sbjct: 231 VRHGLAPDGAIGAGTFAQLNAPLAGRVRQIELTLERLRWTPLLEGPRMIVVNVPEFVLRA 290

Query: 306 WD----AGREVFESKVVVGKT--TRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKR 359
           ++    A +   E KV+VGK   TR TP+    +  +  +P WNVP  I   + +P ++R
Sbjct: 291 YEIHDGAIQVKVEMKVIVGKALDTR-TPLFKEDMRFIEFSPYWNVPPSIARAETVPRLRR 349

Query: 360 DSEYLANHHMEIIRGWSDPEVIDP-ALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTP 418
           D  Y      E + G  D +VI   +    +AV+      R+RQ+ G  NALG  KF  P
Sbjct: 350 DPGYFERQGFEFVSG--DAKVITTLSAASLDAVQRGQL--RIRQRPGPMNALGDIKFVFP 405

Query: 419 NSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPVSTQA--- 475
           N+  IYLH TP+  LF    R  S GCIRVE     A   LA  G  L D P  T+A   
Sbjct: 406 NNENIYLHHTPTPQLFARDRRDLSHGCIRVE-----APVALA--GFVLQDTPGWTEARIR 458

Query: 476 ----------IALKKRIPVHIIYQT-VWYEEGVLHYRDDIYHYDAL 510
                     + L++ +PV + Y T +   +  +++  DIY  D++
Sbjct: 459 EAMEKGESSTLRLRQPLPVVLAYGTAIVKADARVYFFPDIYGLDSV 504