Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., cell wall degradation protein from Caulobacter crescentus NA1000

 Score =  120 bits (300), Expect = 2e-31
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 212 ALVQRLALVNLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTE 271
           AL  RLA    D T  ++    +DA+L + +++ QK  GL  +G++   T+  LN  V  
Sbjct: 209 ALEARLAAE--DPTVAVDAAPVFDAALTQAVQRAQKRFGLNPNGIVDRATLAALNIPVER 266

Query: 272 RLALLALNAERIRLWP-TQQDSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMN 330
           R+  +  N ER R  P T     I VNV    +  +         + V G+    TP+++
Sbjct: 267 RIDQIVANMERWRWLPQTLPAERIQVNVAAAILSVFHHDTPTLTMRAVTGRPGDETPMLS 326

Query: 331 TKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEA 390
           + + S+++NP WNVP  I  ++I P  +    YLA +                   D+  
Sbjct: 327 SMIHSIVLNPPWNVPQSIASKEIWPKERASPGYLARN-------------------DFIV 367

Query: 391 VEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVEN 450
           +  E    RL+Q+AG   ALG  KF+  N   +YLHDTPS+  F++ SR  S GC+R++ 
Sbjct: 368 IPIEGGGTRLQQKAGPLAALGKVKFDFNNPYGVYLHDTPSRSRFDSFSRLASHGCVRLQK 427

Query: 451 AEKFAQTLLANQGITLDDFPVSTQA------IALKKRIPVHIIYQTVWY-EEGVLHYRDD 503
             +    ++ +      +    T A        L ++I V+++Y T +   +G +++R D
Sbjct: 428 PIELVNEVMRDDPTWTPEKVNETLASGETVRAKLPQQIAVYLLYWTAYVTPDGQVNFRQD 487

Query: 504 IYHYD 508
            Y +D
Sbjct: 488 PYGWD 492